Pairwise Alignments

Query, 304 a.a., hydroxymethylbilane synthase from Methanococcus maripaludis S2

Subject, 317 a.a., porphobilinogen deaminase (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 4e-37
 Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 6/249 (2%)

Query: 3   LRIGTRGSTLAMVQTEYIAGLLNDLD--IETEIIIVKTTGDKDQNKKLADLG-IGVFTKE 59
           +RI TR S LAM Q E++   L      +  E++ + T GD   +  LA +G  G+F KE
Sbjct: 14  IRIATRKSPLAMWQAEFVKAELEKAHEGLVVELLPMSTKGDVILDTPLAKVGGKGLFVKE 73

Query: 60  LDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDELNV 119
           L+  MLE + DIAVHS+KDVP  + + L +    +RE P D  +     + +       V
Sbjct: 74  LEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEELPQGAIV 133

Query: 120 GTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGID--LSE 177
           GTSS+RR   ++   P+L  + LRGNV TR+ KL  G YD I++A AGL R  ++  ++ 
Sbjct: 134 GTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEDRIAS 193

Query: 178 FNYKKLDILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGCQA 237
           F     D LPA  QG +G+  R  D ++  +L  +   +T     AER       GGCQ 
Sbjct: 194 F-ISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRLEGGCQV 252

Query: 238 PFGAFAIYD 246
           P GA+A  D
Sbjct: 253 PIGAYAEID 261