Pairwise Alignments

Query, 304 a.a., hydroxymethylbilane synthase from Methanococcus maripaludis S2

Subject, 318 a.a., porphobilinogen deaminase from Herbaspirillum seropedicae SmR1

 Score =  132 bits (332), Expect = 1e-35
 Identities = 92/273 (33%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 5   IGTRGSTLAMVQTEYIAGLLNDLDIETEIIIVKTT--GDKDQNKKLADLG-IGVFTKELD 61
           I +R S LAM Q EY+   L  L  +  I I+ TT  GD+  ++ L+ +G  G+F KEL+
Sbjct: 11  IVSRESRLAMWQAEYVRDRLAALYPQCSISILGTTTRGDQILDRALSKVGGKGLFVKELE 70

Query: 62  NKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDELNVGT 121
             M E   D+AVH LKD+P    +  ++ A  +RE P D  +       D   D   VGT
Sbjct: 71  VAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGAVVGT 130

Query: 122 SSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLSEFNY- 180
           SS+RR + +    P L  K LRGN+ TR+ KL  G+Y  I++A AGL R G+     ++ 
Sbjct: 131 SSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARIRSFL 190

Query: 181 KKLDILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGCQAPFG 240
                LP+P QG + +   +    I ++L  + D+   + + AER   + +G  CQ P  
Sbjct: 191 DPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQIPLA 250

Query: 241 AFAIYDTEEGILNLRCELVDEQGTIKRVKSNEG 273
           A+A  D +   L+LR  +    G        EG
Sbjct: 251 AYATLDGQR--LHLRAMIATPDGLHAAAAEAEG 281