Pairwise Alignments

Query, 304 a.a., hydroxymethylbilane synthase from Methanococcus maripaludis S2

Subject, 315 a.a., porphobilinogen deaminase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  144 bits (362), Expect = 3e-39
 Identities = 97/260 (37%), Positives = 135/260 (51%), Gaps = 8/260 (3%)

Query: 3   LRIGTRGSTLAMVQTEYIAGLLNDLD---IETEIIIVKTTGDKDQNKKLADLG-IGVFTK 58
           L I TRGS LA+ Q E+I  L+       ++  + I+KT GD   +  LA +G  G+F K
Sbjct: 4   LVIATRGSKLALWQAEHIKSLIETEHAGKVDVSLKIIKTKGDIILDVPLAKVGGKGLFVK 63

Query: 59  ELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDELN 118
           E++  +L+   D+AVHS+KDVP    + L +   P+RE P D ++  +    D       
Sbjct: 64  EIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGAR 123

Query: 119 VGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLSEF 178
           VGTSS+RR S L    P+L    LRGNV TR+ KL +GE+D IVMA AGL R G+     
Sbjct: 124 VGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAAPHH 183

Query: 179 N-YKKLDILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGCQA 237
                   LPA  QG +G+  R+  A +  +L  +  + T I   AER  L    GGCQ 
Sbjct: 184 EVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGCQV 243

Query: 238 PFGAFAIYDTEEGILNLRCE 257
           P    A+   ++   N R E
Sbjct: 244 PIAGHAVMTGDD---NFRIE 260