Pairwise Alignments

Query, 304 a.a., hydroxymethylbilane synthase from Methanococcus maripaludis S2

Subject, 310 a.a., porphobilinogen deaminase (RefSeq) from Shewanella sp. ANA-3

 Score =  146 bits (369), Expect = 5e-40
 Identities = 99/248 (39%), Positives = 136/248 (54%), Gaps = 8/248 (3%)

Query: 2   KLRIGTRGSTLAMVQTEYIAGLLNDLD--IETEIIIVKTTGDKDQNKKLADLG-IGVFTK 58
           ++RI TR S LAM Q E++   L  +   I  E++ + T GD   +  LA +G  G+F K
Sbjct: 5   RIRIATRKSPLAMWQAEFVKAELERVHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVK 64

Query: 59  ELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDELN 118
           EL+  MLE++ DIAVHS+KDVP  + + L +    +RE P D  +               
Sbjct: 65  ELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGAT 124

Query: 119 VGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLSEF 178
           VGTSS+RR   L+ + P+L  K LRGNV TR+ KL NGEYD I++A AGLIR  + LSE 
Sbjct: 125 VGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIR--LKLSER 182

Query: 179 NYKKL---DILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGC 235
               +   + LPA  QG +G+  R  D ++  +L  +   +T     AER       GGC
Sbjct: 183 IASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGC 242

Query: 236 QAPFGAFA 243
           Q P GAFA
Sbjct: 243 QVPIGAFA 250