Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., ABC-type antimicrobial peptide transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 24/224 (10%)

Query: 174 NDKKYKVIGILEETGNP--RTENSVILSKDV------------GEELFEINNEYNM---- 215
           +DK + V+GIL+ TG P  RT +  +   +             G      +   NM    
Sbjct: 172 DDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWKNGVPAQGNGRISADQARNMDLTP 231

Query: 216 -MIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAG 274
             I +   G +  + +  ++ E+ + RG+   ++L    L E + S+       L  ++ 
Sbjct: 232 QAITAFMLGLNNKISTFALQREINEFRGEPLLAILPGVALQE-LWSLMGTAEKALFVISL 290

Query: 275 ISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVG-TM 333
             +L G +G+   +  S+ ERR+++ IL+++GA    I ++ V+EA  L L G I G  +
Sbjct: 291 FVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIATLLVLEAFALALAGVIAGLAL 350

Query: 334 LGILIAKAIEYIAAISGYGLIRAWIS---WELIVGVLVFSFVVG 374
           L I IA A  Y+ +  G  L  +W S   W L+ G+LV + ++G
Sbjct: 351 LYIGIAAAQGYVQSAYGLYLPLSWPSEYEWTLLAGILVAALLMG 394