Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., Pyoverdine efflux carrier and ATP binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (302), Expect = 9e-32
 Identities = 95/406 (23%), Positives = 188/406 (46%), Gaps = 25/406 (6%)

Query: 3   ITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVIS 62
           + D V  A R +   + ++ LT++G++IG+ ++V ++++G G +  + +++   G+N+I 
Sbjct: 265 LLDAVQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 324

Query: 63  VLPSQNFGGPAVSKNF-NDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEP 121
           +  S     P  +K   ++ D++A+  +  V+ ++        + + +  H   V   + 
Sbjct: 325 LNGSAP--SPRAAKGIISEYDLAALAALPEVQRIMPVNGADASVRFGNLDHTSYVGGNDT 382

Query: 122 SKFTHVYSKTWGYEPYKGRWIEDSDKYSC----MIGYALATNSFDREID-IGDKITINDK 176
           +     +   + +   +G +  ++D+ S     +IGY +    F    D +G  I I + 
Sbjct: 383 N-----FPIIFNWPVAQGSYFSEADERSAAAVAVIGYRVRQKLFKDVADPVGRYILIENM 437

Query: 177 KYKVIGILEETG-----NPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSE 231
            ++V+G+L E G     +   +   +        LF   +   ++I +  +G+       
Sbjct: 438 PFQVVGVLAEKGASSGDSDADDRVAVPYSAASVRLFGSRHPEYVVIAAKDAGKVKEAEQA 497

Query: 232 EIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMS 291
             +  L    G ++F +     + ++       L++ L  +A ISLLVG +G+ N M M+
Sbjct: 498 VSRTLLRLHDGKKDFELTNNAAMIQAEARTQGTLSLMLGAIAAISLLVGGIGVMNIMLMT 557

Query: 292 ILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGY 351
           + ER ++IGI  A GA    IL  F+ EA  L + GG+ G  L +L+  A+         
Sbjct: 558 VRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGLALLVGGALL-------L 610

Query: 352 GLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           G I     W  + G    + V G++ G+ PAR  A+L+PV  L  E
Sbjct: 611 GKIAVAFEWLAVFGAFGCALVTGVVFGFMPARKAARLDPVAALTSE 656