Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 40/151 (26%), Positives = 83/151 (54%), Gaps = 21/151 (13%)

Query: 258 INSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFV 317
           + +I  ++ + ++GVA  +++       +T+ M++ +R  +I IL+ +GA +  I  IFV
Sbjct: 268 VRTIMYLVMVLVIGVASFNIV-------STLMMAVKDRAGEIAILRTMGATDGLIKRIFV 320

Query: 318 VEAGFLGLFGGIVGTMLGILIA-------KAIEYIAA---ISG----YGLIRAWISWELI 363
            +  F G+ G +VG++LG+++A       K +E++     +SG       + + + W  +
Sbjct: 321 WQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQFLSGDIYFVDFLPSQVEWADV 380

Query: 364 VGVLVFSFVVGILSGYFPARSGAKLNPVDTL 394
           V V   + V+ +L+ ++PAR  ++LNP   L
Sbjct: 381 VLVSGTAIVLSLLATWYPARRASRLNPAQVL 411