Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 101/433 (23%), Positives = 179/433 (41%), Gaps = 63/433 (14%)

Query: 12  RNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISV---LPSQN 68
           + +  +K +  LTI+ V    L I  L+++G G+++ I   I     N+I V     +Q 
Sbjct: 9   QEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQT 68

Query: 69  FG----GPAVSKNFNDNDV--------SAVRNVRGVEEVVAAWFGSYELEYRDQSHYG-- 114
            G    G A+S    D+ V         A+ +    E +  A   S+ + Y  +S Y   
Sbjct: 69  HGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAM 128

Query: 115 NVLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREID---- 166
           N L + P                 GRW    D+       ++GY LA   F+++      
Sbjct: 129 NKLRLLPG----------------GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFS 172

Query: 167 --------IGDKITINDKKYKVIGILEETGNPRTENSVI----LSKDVGEELFEINNEYN 214
                   +G    I   ++ VIG+L +      + S I     +     + F  N   +
Sbjct: 173 GGELEQDPVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAIS 232

Query: 215 MMIVSVRSGED----VNLVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLV 270
            + +  R G D       V + +K +   S  D+   ++    L++     F +     +
Sbjct: 233 GINLEPRVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFL 292

Query: 271 GVAG-ISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTI----LSIFVVEAGFLGL 325
           G+ G I+L V ++GI+N M  ++    +DIG+  A+GA   TI    L+  ++  G  G+
Sbjct: 293 GIIGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGI 352

Query: 326 FG-GIVGTMLGILIAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARS 384
            G G+   M+ +L A  ++        G     +S  +IV V+V   V+GI++ + PA  
Sbjct: 353 AGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANH 412

Query: 385 GAKLNPVDTLRGE 397
            AK+ P+  L+ E
Sbjct: 413 AAKVTPLQALQSE 425