Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 421 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 85/413 (20%), Positives = 175/413 (42%), Gaps = 62/413 (15%)

Query: 13  NITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEIT----TIGANV--ISVLPS 66
           ++  ++  +FLT   + + +  ++++  +    ++   S I+     +GA    I++L  
Sbjct: 10  SLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGARSGSINLLLY 69

Query: 67  QNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTH 126
             F     + N   +      N + V+  +    G     YR       V+    + F H
Sbjct: 70  SVFRIGNATNNIRWDSFEHFANSKQVKWAIPVSLGDSHRGYR-------VMGTNEAYFEH 122

Query: 127 V-YSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITI------------ 173
             + +    E  +GR  + +D +  ++G  +A     +   +GDK+ +            
Sbjct: 123 YQFGRQQHLEMAEGREFK-TDPFEVVLGSEVAKALHYK---LGDKLVLAHGVAAISLVKH 178

Query: 174 NDKKYKVIGILEETGNP--RTENSVILSKDV------------GEELFEINNEYNM---- 215
           +DK + V+GIL+ TG P  RT +  +   +             G E    +   NM    
Sbjct: 179 DDKPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTP 238

Query: 216 -MIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAG 274
             I +   G +  + +  ++ E+ + RG+   ++L    L E + S+       L  ++ 
Sbjct: 239 TAITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQE-LWSLMGTAEKALFVISL 297

Query: 275 ISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTML 334
             +L G +G+   +  S+ ERR+++ IL+++GA    I S+ ++EA  L L G I G  L
Sbjct: 298 FVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLILEAFALALAGVISGLAL 357

Query: 335 ---GILIAKAIEYIAAISGYGLIRAWI-----SWELIVGVLVFSFVVGILSGY 379
              GI +A+  +Y+  +  YGL  + +      W L+  +L  + ++G +  +
Sbjct: 358 LYIGIFVAR--DYV--LDNYGLYLSSMPPGQYEWTLLGAILGCALLMGTVPAW 406