Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 657 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  127 bits (319), Expect = 9e-34
 Identities = 92/404 (22%), Positives = 194/404 (48%), Gaps = 25/404 (6%)

Query: 5   DVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVL 64
           D +  A R +   + ++ LT++G+VIG+ ++V ++++G G +  + +++++ G+N+I + 
Sbjct: 268 DAIRAAWRVMWINRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL- 326

Query: 65  PSQNFGGPAVSKN-FNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSK 123
            +     P   K      +V+A+  +  V+ ++    G   + Y +  H   V       
Sbjct: 327 -NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYV----GGN 381

Query: 124 FTHVYSKTWGYEPYKGRWIEDSDKYSC----MIGYALATNSFDREID-IGDKITINDKKY 178
            TH +   + +   +G +  ++D+ +     +IGY +    F  + D +G  I I +  +
Sbjct: 382 DTH-FPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQYILIENVPF 440

Query: 179 KVIGILEE----TGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIK 234
           +V+G+L+E    +G+  ++N + +             +   + ++ R   +V    + I+
Sbjct: 441 QVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGTQDPEYITIATRDANNVKQAEQSIR 500

Query: 235 DELED-SRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSIL 293
           + L+    G +++ +     + ++       L++ L  +A ISLLVG +G+ N M M++ 
Sbjct: 501 NLLQQLHHGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVR 560

Query: 294 ERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGL 353
           ER ++IGI  A GA  + IL  F+ EA  L + GG+ G +L + +  A+        + L
Sbjct: 561 ERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAALLLSKVAVAFTL 620

Query: 354 IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                    + G    + + G++ G+ PAR  A+L+PV  L  E
Sbjct: 621 -------PAVAGAFACALITGVIFGFMPARKAARLDPVAALTSE 657