Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 416 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 20/179 (11%)

Query: 236 ELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISN---TMHMSI 292
           E+    G+ NF    +     +  ++++ + +    +  + LL+ AV   N   T+ M +
Sbjct: 241 EIAQKLGENNFY---SRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVV 297

Query: 293 LERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGIL----IAKAIEYIAAI 348
            +++ DI IL+ LGA    I++IF+V+   +G+ G ++G  LGIL    ++ AI  +  +
Sbjct: 298 NDKKGDIAILRTLGATPRQIMAIFMVQGTVIGVVGTLIGAALGILAALNVSAAIAALEGL 357

Query: 349 SGYGLIRAWISW----------ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            G+  + A + +          + +  V   + V+  L+  +PA   A+  P + LR E
Sbjct: 358 IGHKFLNADVYFIDYLPSQLMAQDVFQVCGAALVLSFLATLYPAWRAARTQPAEALRYE 416