Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 407 a.a., ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  152 bits (383), Expect = 2e-41
 Identities = 112/399 (28%), Positives = 198/399 (49%), Gaps = 33/399 (8%)

Query: 18  KTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPSQNFGGPA---V 74
           K +S LT++G+VIG  ++V+++ +G G Q   TS++  +G NV+ VLP       A   +
Sbjct: 19  KLRSSLTMLGIVIGNASVVAMLGIGQGAQELATSQLEDLGPNVLFVLPGSQRNRRASFNL 78

Query: 75  SKNFNDNDVSAVRN-VRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTHVYSKTWG 133
            K    +D  A+   V  V  V         + +R+ +    ++   P      Y     
Sbjct: 79  PKTLVLSDAEAIAGQVPSVAGVAPEINRRLLVSHRNLNTNATIVGTTPE-----YPAIRN 133

Query: 134 YEPYKGRWIEDSD----KYSCMIGYALATNSFDREIDIGDKITINDKKYKVIGILEETGN 189
           +   +GR++   D    +   ++G  +A   +  +  +G  I IN+  ++VIG++E  G+
Sbjct: 134 FSVAQGRFLNILDLERHRRVAVLGSEIADRLYQTQTPLGQNIRINNITFEVIGVMETKGS 193

Query: 190 PRTENS---------VILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKDELE-- 238
               N           ++++ VG        E + + V  + G+ V   + ++++ L   
Sbjct: 194 SLGSNQDEFIFIPLDTMVAQLVGRTS-PYGIELSWINVKAKDGDSVGAATFQMENLLRLR 252

Query: 239 --DSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERR 296
                G+++F V +A+Q+ + +N+I   LTI L  +AGISL+VG +G+ N M +S+ ER 
Sbjct: 253 HNIKNGEDDFGVSSAKQMLDIVNTITGGLTILLAAIAGISLIVGGIGVMNIMLVSVTERT 312

Query: 297 KDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRA 356
           ++IG+ KALGA    ILS F++EA  +   GG++G +LG+ I      +A +     +  
Sbjct: 313 QEIGLRKALGAGEQDILSQFLIEAVIVSASGGVIGVVLGMAI------VAIVGSLSPLIT 366

Query: 357 WISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
            IS   +V  L  S  +G+  G  PAR  AKL+P+  LR
Sbjct: 367 VISPAAVVVSLTISGSIGLFFGVVPARQAAKLDPIVALR 405