Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 417 a.a., ABC transporter permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (321), Expect = 3e-34
 Identities = 103/406 (25%), Positives = 201/406 (49%), Gaps = 42/406 (10%)

Query: 18  KTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGAN--VISVLPSQNFGGPAVS 75
           K ++ LT++G++ G+ A+++++S+G G +      I ++G    V++  PS+      V 
Sbjct: 24  KLRTALTLLGMIFGVGAVIAMLSVGEGAEREALKMIESMGIKNLVVNARPSEGEALKTVR 83

Query: 76  KN---FNDNDVSAVRNVRGVEEVVAAW-----FGSYELEYRDQSHYGNVLVIEPSKFTHV 127
           ++    +  D+ +        E  +A      FG + ++ R  +    V        T  
Sbjct: 84  EHSIGLSLRDIESAMETLPFIEAYSAGKQVKVFGLFSVQGRSDALVQGV--------TPS 135

Query: 128 YSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREIDIGDKITINDKKYKVIGI 183
           Y      +  +GR + D D+       ++G   A + F R   +G +I IN + + V+G+
Sbjct: 136 YFDLSALKLAEGRLLGDEDEQHFRQLAVLGPEAARSLFPRGDAVGQRIKINHQWFTVVGV 195

Query: 184 LEE------------TGNPRTENSVILSKDVGEELFE-INNEYNMMIVSVRSGEDVNLVS 230
           L+E             G  R +  + L+  + +  F+ + +E + +  +++ G D +L +
Sbjct: 196 LDEGEKGKSAIEGVKVGGERNQVFIPLATALKKMQFKPLEDELDTIKFALKEGIDPSLAA 255

Query: 231 EEIKDELEDSRGDE-NFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMH 289
           + ++  L    G+E ++ ++    L        ++  I +  VAGISLLVG +GI N M 
Sbjct: 256 KSVEHLLSRRHGNEQDYDIVVPADLLAQHQRTQQIFNIVMACVAGISLLVGGIGIMNIML 315

Query: 290 MSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAIS 349
            +ILER  +IG+L+ALGA    I   F++E+  +   GG++G  +G+L+A     I+A +
Sbjct: 316 ATILERTSEIGLLRALGATQKDIARQFLIESMVISATGGLIGIGVGLLLALV---ISAAA 372

Query: 350 GYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
           G+ +  AW  + +++ +LV    VGI  G +PA+  A+L+P+  L+
Sbjct: 373 GWPV--AWSVFAILLSLLV-CMAVGIGFGLYPAKKAARLDPIVALQ 415