Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 417 a.a., Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 97/430 (22%), Positives = 182/430 (42%), Gaps = 65/430 (15%)

Query: 10  AGRNITQKKTQSFLTII------GVVIGILAIVSLISLGFGVQNYITSEITTIGANVISV 63
           AGR +  ++ + F+++I      G+ +G+  ++ ++++  G +  +   I  +  + ++V
Sbjct: 11  AGRYLRARRKEGFVSVIAGFSLAGIGLGVATLIIVMAVMNGFREDLMGRIFGLNGH-LTV 69

Query: 64  LPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSK 123
           L     G   V  ++ D     +R + GV  V     G   L    +S  G V  + P  
Sbjct: 70  L-----GQYDVMMDY-DRATDIIRGIPGVRAVTPTVEGQVMLTDNGRSVGGLVRGVRPED 123

Query: 124 FTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKKYKV--- 180
                          G   +   + S MIG  LA N   R   +GDK+T+   K KV   
Sbjct: 124 LRQ--RPMLANAVIAGSLDDLRGQDSIMIGNRLAENFGLR---VGDKLTLVSPKGKVTAM 178

Query: 181 ----------IGILEETGNPRTENS-VILSKDVGEELFEINNE-YNMMIVSVRSGEDVNL 228
                     + ++   G    ++S V L  +  +  F++  E  N + V V   + V  
Sbjct: 179 GTVPRVRAYTVRVIFSIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGE 238

Query: 229 VSEEIKD-------ELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGA 281
           V+  I          L D R   N +   A Q+  ++  +F +LT+ +V VA  +++ G 
Sbjct: 239 VAGTIASTNGLGGIRLRDWR-QTNATFFNALQVERNV--MFLILTLIIV-VAAFNIISGL 294

Query: 282 VGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKA 341
           +       M + ++ +DI IL+ +GA    I+ IF +    +G+ G + G +LG+L  + 
Sbjct: 295 I-------MLVKDKGRDIAILRTMGASRGAIMRIFFLAGAAVGVTGTLAGLLLGVLFCQN 347

Query: 342 IEYI----AAISGYGLIRAWISW----------ELIVGVLVFSFVVGILSGYFPARSGAK 387
           IE I     ++ G  L  A I +            ++ V++ +  +   +  +PA   A+
Sbjct: 348 IEAIRQGLQSLLGVELFNAEIYFLATMPATMDPHEVMNVVLMALGLSFAATLYPAWRAAR 407

Query: 388 LNPVDTLRGE 397
            +PV+ LR E
Sbjct: 408 TDPVEALRNE 417