Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 426 a.a., lipoprotein-releasing ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 35/244 (14%)

Query: 176 KKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKD 235
           K YKV  + E   +      V +     +  F   N+   + V   + + +++  + + +
Sbjct: 196 KPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRANDVTAIEVYTDNPDRIDVFRKAVTE 255

Query: 236 E------LED--SRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNT 287
                  L D   R    F+ L  E+     N +F +LT+ +        LV A+ I + 
Sbjct: 256 AAGRPVFLVDWRQRNSTFFNALQVER-----NVMFLILTLIV--------LVAALNIISG 302

Query: 288 MHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAA 347
           + M + ++  DI IL+ +GA   +I+ +F++    +G+ G + G  +G+L+   IE I  
Sbjct: 303 LIMLVKDKGADIAILRTMGASQGSIMRVFLITGAAIGVVGTLTGFFVGVLVCMNIESIRQ 362

Query: 348 ISGY--------------GLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDT 393
              +                + A I +     V++ +  +  L+  +P+   A+L+PVD 
Sbjct: 363 FLSWVTNTELFSPELYFLSKLPAEIDFAETSAVVIMALTLSFLATLYPSWRAARLDPVDA 422

Query: 394 LRGE 397
           LR E
Sbjct: 423 LRYE 426