Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  590 bits (1521), Expect = e-173
 Identities = 297/397 (74%), Positives = 344/397 (86%)

Query: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60
           M+  DVVSFAGRNITQKKTQS LTIIG+VIGILAIVSLISLG+GVQNYIT EI+  GA+V
Sbjct: 1   MKPKDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASV 60

Query: 61  ISVLPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIE 120
           I+V PSQ     A+SKNFND D+ AV  VRGV+ V+  WFG  ++ Y DQ +Y +V   +
Sbjct: 61  ITVYPSQQITSIAMSKNFNDQDLKAVEGVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATK 120

Query: 121 PSKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKKYKV 180
            S +   +++ +GYE  KGRW++DSDKY+C+IGY+LA ++FDREIDIGDKI INDKKYKV
Sbjct: 121 SSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKV 180

Query: 181 IGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKDELEDS 240
           +GILE+ GNP  +NS+++  +   E+F++++EYNM +V ++ GEDV  VSE+I+DELEDS
Sbjct: 181 VGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDS 240

Query: 241 RGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG 300
           RGDENFSVLTAEQLAESI+SIF VLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG
Sbjct: 241 RGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG 300

Query: 301 ILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRAWISW 360
           ILKALGAEN TILSIFVVEAGFLGLFGGI+GT+LGILIAKAIEYIAAISGYGLIRAWISW
Sbjct: 301 ILKALGAENNTILSIFVVEAGFLGLFGGIIGTILGILIAKAIEYIAAISGYGLIRAWISW 360

Query: 361 ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE
Sbjct: 361 ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397