Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 407 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  201 bits (510), Expect = 4e-56
 Identities = 126/412 (30%), Positives = 222/412 (53%), Gaps = 20/412 (4%)

Query: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60
           M+ + +   A   +   K +S++TIIGVV+ + +++++IS G  ++  +T E+  +G +V
Sbjct: 1   MKPSKIFKLAFNMVKGSKLRSWITIIGVVVAVASVITIISAGELMEKQVTHELEKLGGDV 60

Query: 61  ISVLPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIE 120
           ISV         + +      DV  ++ +  V+ V        ++ Y D+  Y  +  ++
Sbjct: 61  ISVYAITTETS-SKTPELTKTDVLVIKGIPSVKYVDKRVTSYSKISYGDKELYSQITGVD 119

Query: 121 PSKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKKYKV 180
           P+    V+ K    +   GR ++  DK   +I   LA   F+R+I+I   I I +K ++V
Sbjct: 120 PA----VWPKITQEKVETGRMLQPGDKNVVVINNYLANEEFNRKININQIIKIGNKSFRV 175

Query: 181 IGILEETGNPRTE----------NSVI-LSKDVGEELFEINNEYNMMIVSVRSGEDVNLV 229
           IGIL+   +              +SV  + +D    + +    Y+ + + ++   D +  
Sbjct: 176 IGILDNDSSGLASLFSGGIYAPLDSVYDIEQDSDYSVPKERGTYDSLEIKLKENVDTDAA 235

Query: 230 SEEIKDELEDSRG----DENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGIS 285
            ++I+ +L  SR     +++F + +A+   ES  SI   +T+FL  +AGISL+VGA GIS
Sbjct: 236 VQDIEQKLRTSRHVTEKNQDFYISSAKSFIESSQSIIGGITLFLSFIAGISLIVGAFGIS 295

Query: 286 NTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYI 345
           NTM  ++LE+ K+IGI+KA+GA+N  IL +F+  +G +GL GG +G ++G+LI + I Y+
Sbjct: 296 NTMFTAVLEKTKEIGIMKAIGAKNEDILLLFLFNSGLIGLAGGFLGLLIGVLITQVITYV 355

Query: 346 AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            A+        ++S + +V  LV S   GIL+G  PA + +KL PVD LR E
Sbjct: 356 IALKFGTPFEFYVSIKSVVVALVVSIGAGILAGAVPAYNASKLKPVDALRSE 407