Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 647 a.a., macrolide ABC transporter permease/ATP-binding protein MacB from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 9e-34
 Identities = 102/412 (24%), Positives = 196/412 (47%), Gaps = 35/412 (8%)

Query: 3   ITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVIS 62
           I + V  A R++   + ++FL+++G++IGI ++VS +++G G +  I +EI  +G   + 
Sbjct: 254 IGESVRMAWRSLLGHRMRAFLSMLGIIIGISSVVSSMAVGEGARQSIMNEIGKLGNTTLE 313

Query: 63  VLPSQNFGG--PAVSKNFNDNDVSAVRN---VRGVEEVVAAWFGSYELEYRDQSHYGNVL 117
           + P   +G   P + +  + +D++++     V+GV  +V++   +    +        V 
Sbjct: 314 IRPGTGWGSKRPDMERALSLDDIASLGRQPWVQGVSPIVSSMTTAVRQGFDSSIILSGVS 373

Query: 118 V----------IEPSKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDI 167
                      I+ + FTH             R +ED +    +   +  T     E  +
Sbjct: 374 AEYFSLQGMRFIQGNGFTH-------------RDVEDREPVLVLDETSRETLFPGNEDPL 420

Query: 168 GDKITINDKKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVN 227
           G  + I    ++VIGI  + G       +         L  I+ +  +  +++R  E ++
Sbjct: 421 GKIVQIAGAPWRVIGIASKPGPKVVSGFMSAWIPYTSLLQRISGDKPLEALTLRFQETLS 480

Query: 228 L--VSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGIS 285
               +   +  L    G ++F V T EQLA+++    + +++ +  +A ISLLVG VG+ 
Sbjct: 481 PQDAARRAERHLIREHGKKDFFVQTDEQLAKALQKTSDSMSLLITAIAAISLLVGGVGVM 540

Query: 286 NTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYI 345
           N M +S+ ER  +IGI  ++GA  + I+  F++EA  +   GG+ G +LG   A  + + 
Sbjct: 541 NIMLVSVTERTHEIGIRLSVGARPSDIMHQFLIEAVMICALGGLTG-VLGSWAAGNL-FA 598

Query: 346 AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                + ++  W+   +  G   FS ++G+  GYFPAR  A+LNP + L  E
Sbjct: 599 LLTQEFSMVFTWLPVAMACG---FSALIGLTFGYFPARRAARLNPTEALARE 647