Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 93/412 (22%), Positives = 184/412 (44%), Gaps = 45/412 (10%)

Query: 12  RNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPSQ---N 68
           +++   +T++ L ++GV +G LA+ +++ +   +      E   +G N++  L  Q    
Sbjct: 9   KSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFR 68

Query: 69  FGGPA----VSKNFNDNDVSAVRN-VRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSK 123
             GP+    V++ F   D  A+   V  V + V        + Y        ++   P  
Sbjct: 69  RDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLPG- 127

Query: 124 FTHVYSKTWGYEPYKGRWIEDSDKYS----CMIGYALATNSFDREID-IGDKITINDKKY 178
               +++   Y P  GR+I D D+      C++G A+AT  F+R  + +G  +       
Sbjct: 128 ----FARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPV 183

Query: 179 KVIGILEETGNPRTENSVILSKDVGEELFEINNEY----------NMMIVSVRSGEDVNL 228
           +V+G++EE G        +   ++ E+++   + Y          + + +++  G D   
Sbjct: 184 QVVGVMEEKGQD------VSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEA 237

Query: 229 VSEEIKDELEDSR-----GDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVG 283
               +   L           ++FSVL+A    +      +++    V  + IS  VG++G
Sbjct: 238 ARAAVTAILRSRHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLG 297

Query: 284 ISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIE 343
           I + M + +  RR +IG+ +A+GA    I+  F+ EA   GL  G+ GT LG+++A A+ 
Sbjct: 298 ILSIMTLLVRARRLEIGVRRAVGASRNVIVRQFLAEA---GLMAGVGGT-LGVVVALAL- 352

Query: 344 YIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
            +  +   G         L  G  + S V+G+ +G +PA   ++++ +D LR
Sbjct: 353 -VTVVYAVGDFPYTYDPLLAAGACIASVVLGVAAGAYPAWQASRVDVLDVLR 403