Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 372 a.a., glycine/betaine ABC transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  273 bits (699), Expect = 4e-78
 Identities = 136/283 (48%), Positives = 206/283 (72%), Gaps = 3/283 (1%)

Query: 2   DEPIIQVTELYKIFGKK-PEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVI 60
           +E ++    ++KIFG+  P     ++++G ++  I +    VVG+ N++  V+RGEIF I
Sbjct: 9   NEVLVDCQNVWKIFGESAPAAMQAVVQQGLTKTRILQDYSCVVGVSNVSLQVRRGEIFCI 68

Query: 61  MGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLL 120
           MGLSGSGKSTLIR +N+LI P+ GK++++ G D+S +S  +L E+R ++ GMVFQ   LL
Sbjct: 69  MGLSGSGKSTLIRLLNKLITPSSGKVLVK-GKDLSTLSAAQLREVRARHIGMVFQSVALL 127

Query: 121 PNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARG 180
           PNR+VLEN A GLE+QG+G  ER + +E+AL+ VGL  W +   SELSGGMQQRVGLAR 
Sbjct: 128 PNRTVLENTAFGLEVQGIGKAERYKVAERALAKVGLSEWSQRYPSELSGGMQQRVGLARA 187

Query: 181 LAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMIL 240
           +  +PE++LMDEPFSALDPLIR ++Q+   ++ K++ K+ +FITHDL+EAI++GDRI I+
Sbjct: 188 ITADPEVILMDEPFSALDPLIRRQLQDEFRQLTKELGKSAVFITHDLDEAIRIGDRIAIM 247

Query: 241 NEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLV 283
            ++G ++Q+   EEI+L P +D+V  FV  + +  +++A S++
Sbjct: 248 -KDGVIIQVGTAEEIVLKPADDYVAEFVAGISRLHLVKAHSVM 289