Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 399 a.a., Glycine betaine/L-proline transport ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  300 bits (768), Expect = 5e-86
 Identities = 166/383 (43%), Positives = 247/383 (64%), Gaps = 15/383 (3%)

Query: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65
           I V  LYK+FG  PE A  L + G  R  I+ KT   +G+ + +F ++ GEIFVIMGLSG
Sbjct: 5   IAVKGLYKVFGDTPETAIALSRSGADRSAIQRKTGMTMGVCDASFTIQEGEIFVIMGLSG 64

Query: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125
           SGKSTL+R +NRLI+P+ G IV++ G DI+ ++E +L   R ++  MVFQ F L+P+ +V
Sbjct: 65  SGKSTLVRLLNRLIEPSAGSIVID-GIDIAGLAEADLNAFRHRHLSMVFQSFALMPHLTV 123

Query: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185
           L N A GLE+ G+   ER  ++  AL+ VGL  W     + LSGGM+QRVGLAR LA +P
Sbjct: 124 LGNAAFGLELSGVKRPEREARARAALTQVGLADWANQFPTALSGGMRQRVGLARALATDP 183

Query: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245
           ++LLMDE FSALDPL R EMQ+ LL +Q + ++TIIFITHDL+EA+++GDRI I+ E G 
Sbjct: 184 DVLLMDEAFSALDPLNRAEMQDQLLSLQDEQRRTIIFITHDLDEAMRIGDRIAIM-EAGR 242

Query: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFTLNNTIEKENAVKI--- 302
           +VQ+  P+EIL NP +D+V SF + V+   V+ A S+ +K + T+   I++E  +++   
Sbjct: 243 IVQIGTPDEILNNPADDYVRSFFRGVNLGAVLSAGSIARKRQVTM---IDREGGLRVALQ 299

Query: 303 -LGELNLDFAYVLDDSGKYIGVVNNEELQN-SEKIMDCIH-----KIKPLEDVKTINQGL 355
            L E + D+AYV+D + +Y GVV+   L+    K    +H      + P+     +++ +
Sbjct: 300 RLAEADRDYAYVIDKAQRYHGVVSVASLEALRHKPGAALHDAFLGDVSPVPAATILSEII 359

Query: 356 PQFISSDYPVPIVDDENNFLGYV 378
            Q   +   +P++DD   +LG +
Sbjct: 360 TQVAQAPCGLPVIDDAGRYLGVI 382