Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 385 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  183 bits (465), Expect = 6e-51
 Identities = 117/358 (32%), Positives = 195/358 (54%), Gaps = 19/358 (5%)

Query: 40  KQVVGLRNINFDVKRGEIFVIMGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSE 99
           K V  + +++  V  GEI V +G SG GKST ++ INRLIKPT GKI++  G D + + E
Sbjct: 16  KTVSAVNDVSLTVNEGEICVFLGPSGCGKSTTLKMINRLIKPTSGKILIN-GEDTTDLDE 74

Query: 100 KELLEIRRKYFGMVFQKFGLLPNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGL--K 157
             L    R+  G V Q+ GL PN ++ EN+ +  ++ G   ++  +++ + +S++ L  K
Sbjct: 75  VTL----RRNIGYVIQQIGLFPNMTIEENIVVVPKLLGWDKQKCHDRARELMSMIKLEPK 130

Query: 158 GWEKSKISELSGGMQQRVGLARGLAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMK 217
            +      ELSGG QQR+G+ R LA +  +LLMDEPF A+DP+ R  +Q    ++Q+ + 
Sbjct: 131 QYLHRYPRELSGGQQQRIGVIRALAADAPLLLMDEPFGAVDPINREMIQNEFFEMQRALN 190

Query: 218 KTIIFITHDLNEAIKLGDRIMILNEEGSLVQLSHPEEILLNPQNDFVESFV---KDVDKT 274
           KT+I ++HD++EAIKLGD+I I    G L+Q+ HP+ +L +P ++FV +FV     + + 
Sbjct: 191 KTVIMVSHDIDEAIKLGDKIAIF-RAGKLLQIDHPDTLLAHPADEFVSNFVGQDSTLKRL 249

Query: 275 TVIRAESLVKKPEFTLNNTIEKENAVKILGELNLDFAYVLDDSGKYIGVVNNEELQNSEK 334
            +++AE            T   E A++ + EL+  +  V     K +G V   +L    +
Sbjct: 250 LLVKAEDAADNAPSVSPETPVAE-ALEQMDELDRRYVVVTCAENKALGYVRRRDLH--RQ 306

Query: 335 IMDCIHKIKPLEDVKTINQGLPQFISSDYP-----VPIVDDENNFLGYVEFEEVIKLI 387
              C   ++        ++ L   +S  Y      +P++D E  FLG V  E + + +
Sbjct: 307 TGTCGQYLREFNATAAYDEHLRILLSRMYEFNRSWLPVMDAERVFLGEVTQESIAEYL 364