Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 351 a.a., putative glycine betaine transport ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  271 bits (692), Expect = 3e-77
 Identities = 137/286 (47%), Positives = 200/286 (69%), Gaps = 3/286 (1%)

Query: 3   EPIIQVTELYKIFGKKPEKAYPLIKE-GFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIM 61
           E +++++ ++KIFG  P+ A   I++ G S+ E+  +   VVG+ +I+  V RGEIF IM
Sbjct: 4   ETVVEISNVWKIFGHNPQAALQAIRDRGLSKAEVLSEMGAVVGVADISLSVNRGEIFCIM 63

Query: 62  GLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLP 121
           GLSGSGKSTL+R  NRL++PT GKI +E G D+  +  K L + R    GMVFQ F L+P
Sbjct: 64  GLSGSGKSTLVRHFNRLLEPTAGKIEIE-GTDVMALGAKNLQQFRNNKIGMVFQNFALMP 122

Query: 122 NRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGL 181
           +RSVL+NVA+ LEI+ +   ER+ ++   L +V L  W      ELSGGMQQRVGLAR L
Sbjct: 123 HRSVLDNVAMPLEIRQVAKNERMRQAAAILDVVELGAWSSKFAHELSGGMQQRVGLARAL 182

Query: 182 AVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILN 241
           A NP++LLMDEPFSALDPLIR ++Q+  +++ K +KKT IFITHDL+EA+++GDRI I+ 
Sbjct: 183 AANPDVLLMDEPFSALDPLIRRQLQDEFIRLSKILKKTTIFITHDLDEAVRIGDRIAIM- 241

Query: 242 EEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPE 287
            +G +VQ+   E+I+++P +D+V  FV  + +  V+ A ++++  E
Sbjct: 242 RDGKMVQMGTAEDIVMHPADDYVADFVAGISRLKVVHAHAVMQPLE 287