Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 344 a.a., amino acid transport sytem, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  244 bits (624), Expect = 2e-69
 Identities = 135/320 (42%), Positives = 203/320 (63%), Gaps = 7/320 (2%)

Query: 11  LYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSGSGKST 70
           ++K++G   E A+       S ++I+ K   +  +R+   D+  GEIF+IMGLSGSGKST
Sbjct: 12  IWKLYGANAE-AFLNANPTPSGEDIR-KAGIIGAVRDARIDIAEGEIFIIMGLSGSGKST 69

Query: 71  LIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSVLENVA 130
           L+RC++RLI+PT G+++ + G D+   SE+EL+EIRR   GMVFQ F LLP+ +VL+NV 
Sbjct: 70  LVRCLSRLIEPTGGQVLFD-GVDLLTASEQELIEIRRHKMGMVFQHFALLPHLTVLQNVM 128

Query: 131 LGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNPEILLM 190
             L +Q +   E   K+ + + LVGLKG E     ELSGG QQRVG+AR L   P++  +
Sbjct: 129 FPLTVQAVPKSEAEVKAREVVELVGLKGREDYYPRELSGGQQQRVGIARSLVTEPDLWFL 188

Query: 191 DEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGSLVQLS 250
           DEPFSALDPLIR EMQ+  L++Q ++ KTI+FITHD  EA++L DRI I+ ++G ++Q++
Sbjct: 189 DEPFSALDPLIRREMQDEFLRLQARLHKTIVFITHDFEEAVRLADRIAIM-KDGHIIQIA 247

Query: 251 HPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFTLNNTIEKENAVKILGELNLDF 310
            PEE++LNP  D+V  F + + ++ V+    ++          + +   V  + E  +  
Sbjct: 248 TPEELVLNPATDYVAEFTRHIPRSKVLTVGGIMASGTDGEGTPVPQTARVSDVAEQIIAA 307

Query: 311 ---AYVLDDSGKYIGVVNNE 327
                V DDSG+ IG +N +
Sbjct: 308 DAPRPVCDDSGRIIGSINRQ 327