Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 352 a.a., glycine betaine transport ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  277 bits (708), Expect = 4e-79
 Identities = 154/340 (45%), Positives = 230/340 (67%), Gaps = 16/340 (4%)

Query: 1   MDEPIIQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVI 60
           M +P+++++ LYKIFG + +     ++ G  ++E+  + K V+GL NIN D++ GEI V+
Sbjct: 1   MTQPMVRLSGLYKIFGARDKDVLHHVQGGMGKEELLAQHKHVLGLNNINVDMQAGEITVV 60

Query: 61  MGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLL 120
           MGLSGSGKSTLIR +NRLI+PT G+I+++ G D+ Q+SE  L   R++   MVFQKF LL
Sbjct: 61  MGLSGSGKSTLIRHLNRLIEPTAGEIIVQ-GEDVMQLSEDGLRHARQEKMSMVFQKFALL 119

Query: 121 PNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARG 180
           P+++VL+N  + L ++G        ++ K L  VGL G+E    ++LSGGMQQRVG+AR 
Sbjct: 120 PHKTVLKNAGMPLSVRGEDEATCDREAAKWLERVGLSGFENHYPAQLSGGMQQRVGIARA 179

Query: 181 LAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMIL 240
           L  N  I+LMDE FSALDPLIR +MQ+LLL++QK++ KTIIFITHDL+EA+KL D ++IL
Sbjct: 180 LTANTPIMLMDEAFSALDPLIRTDMQDLLLELQKELHKTIIFITHDLDEALKLADHLVIL 239

Query: 241 NEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLV------KKP-----EFT 289
            ++G +VQ   P+ ILLNP + ++E FV D+++  V+R  S++      K P     E  
Sbjct: 240 -KDGFVVQQGEPQHILLNPNDPYIEDFVSDINRARVLRVRSIMTPLVGGKVPKDAHGEVD 298

Query: 290 LNNTIEKENAVKILGELNLDFAYVLDDSGKYIGVVNNEEL 329
           +N+T+E   A +  G+ +   AYV+ D  + +G ++  EL
Sbjct: 299 VNDTLESMIA-RSGGDTS--HAYVVKDGEQTVGTLDMTEL 335