Pairwise Alignments

Query, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 397 a.a., glycine/betaine/L-proline ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  296 bits (759), Expect = 5e-85
 Identities = 163/382 (42%), Positives = 249/382 (65%), Gaps = 13/382 (3%)

Query: 6   IQVTELYKIFGKKPEKAYPLIKEGFSRQEIKEKTKQVVGLRNINFDVKRGEIFVIMGLSG 65
           + +  L KIFG  PEKA  L+++G  ++EI  +T   VG+   +FDV+ GEI V+MGLSG
Sbjct: 4   LSIRNLTKIFGPHPEKALGLLEQGLGKEEIHRRTSHAVGVDRASFDVEEGEIVVVMGLSG 63

Query: 66  SGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKELLEIRRKYFGMVFQKFGLLPNRSV 125
           SGKSTL+RC+NRLI+PT G + ++ G D++ M   EL  +R++ FGMVFQ F L P+R+V
Sbjct: 64  SGKSTLVRCLNRLIEPTAGTVTVD-GRDVTSMPVDELRRLRQRSFGMVFQNFALFPHRTV 122

Query: 126 LENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEKSKISELSGGMQQRVGLARGLAVNP 185
           L+N A GLE  G+   ER  ++  +L  VGL  W  S+ ++LSGGMQQRVGLAR L+++P
Sbjct: 123 LQNAAFGLEAMGVPRAERERQAMVSLERVGLAEWAASRPAQLSGGMQQRVGLARALSLDP 182

Query: 186 EILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTIIFITHDLNEAIKLGDRIMILNEEGS 245
           +ILLMDE FSALDPLIR +MQ+ LL++Q  ++KTI+FI+HDL+EA+KLGDRI +L  +G+
Sbjct: 183 DILLMDEAFSALDPLIRRDMQDELLRLQDDLQKTIVFISHDLDEALKLGDRI-VLMRDGA 241

Query: 246 LVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAESLVKKPEFTLNNTIE-KENAVKILG 304
           +VQ+  PE+IL NP +D+V  FV + D T V+ A S++K+ E      I+    A++ + 
Sbjct: 242 VVQIGTPEDILTNPADDYVARFVGEADVTKVLTAGSVMKRSEAVAVLGIDGPRTALRKMR 301

Query: 305 ELNLDFAYVLDDSGKYIGVVNNEELQN--SEKIMDCIHKIKPLEDVKTINQGLP--QFIS 360
              +   +VLD+  + +G++  ++     +E + +    ++   D+ T+    P  + IS
Sbjct: 302 RNAIATLFVLDERHRLVGLITADDAARLAAEGVRELGSIVR--RDIATVPPEAPATELIS 359

Query: 361 ----SDYPVPIVDDENNFLGYV 378
                 +P+ +VD+     G +
Sbjct: 360 LMADLPHPLAVVDERGRLAGVI 381