Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 238 a.a., L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTL--LDPMLDVMQTLPSLAYLIPAVLFFGIG 151
           L L++ S L ALL+GIP GI  +R  +V        + ++  T+P LA L  A+   GIG
Sbjct: 46  LLLVLASMLAALLVGIPAGIALSRPGMVGRAERFMQVFNIGNTVPPLAVLAIALGILGIG 105

Query: 152 EVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMM 211
             P + A  + ++ P ++ T  G++ V   L E     G T  Q+L K+ELP AVP I+ 
Sbjct: 106 SGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVPIIVG 165

Query: 212 GVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFD 266
           GV  A+ ++     +A  IG+  LG +I  GI   +    L        LA++ D
Sbjct: 166 GVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLD 220