Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 227 a.a., Glycine betaine ABC transport system permease protein from Pseudomonas fluorescens FW300-N2E2

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 49/165 (29%), Positives = 87/165 (52%)

Query: 100 STLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIAT 159
           S  IA  + +PLG++ A  +  + +   + ++ + LPSL  +I A++  G      +IA 
Sbjct: 37  SLAIACAIALPLGVLMANYRKGAQVAIGLFNIGRALPSLGIVILAIMLIGYETSTVIIAL 96

Query: 160 VIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIML 219
           V  ++PP +  T +GI+QV + L    ++ G   WQ+  ++ELP A P I  G   A++ 
Sbjct: 97  VTMSIPPILTNTYVGIDQVDSSLKHAAKSMGMRRWQMFIQLELPLAFPLIFSGFRSALVQ 156

Query: 220 SFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVI 264
             +   IA + G GGLG  +I G+ R  +   +   + V+ LA++
Sbjct: 157 LIATATIAAYAGFGGLGRFLIDGLGRNDIPQIIGGALVVSALAIV 201