Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 283 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (577), Expect = 3e-64
 Identities = 118/269 (43%), Positives = 175/269 (65%), Gaps = 1/269 (0%)

Query: 3   DTFNLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIV 62
           ++F   I  ++ + +D L+  Y   F  IS  +   +     LL     +LM++++  I 
Sbjct: 4   ESFTFSIANWVNDGVDSLVTQYGDVFRHISDTLLWAIVNLEGLLRMAPWWLMLMIVGGIA 63

Query: 63  WK-TVNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLV 121
           W  T  + + L  V  L ++  +GLWD  M TL+L++ +T+IA+L+GIPLGI+ ARS  +
Sbjct: 64  WHATRKIVTTLVIVGLLFLVGAVGLWDKLMQTLALMLVATIIAVLIGIPLGILSARSNRL 123

Query: 122 STLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNE 181
            ++L P+LD+MQT+PS  YLIP ++ FG+G+VP + ATVI+A PP I+LT LGI QV  E
Sbjct: 124 RSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGE 183

Query: 182 LIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIIS 241
           ++E   AFG   WQ L  ++LP A+PSIM G+NQ  M++ SMVVIA  IG+ GLGE ++ 
Sbjct: 184 VMEAINAFGANRWQQLFGVQLPLAMPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLV 243

Query: 242 GIQRYSLAPALEAGIAVTFLAVIFDRITR 270
           GIQ  ++   LEAG+A+  LAV+ DRIT+
Sbjct: 244 GIQTLNVGRGLEAGLAIVILAVVIDRITQ 272