Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 281 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  211 bits (538), Expect = 1e-59
 Identities = 103/263 (39%), Positives = 172/263 (65%), Gaps = 1/263 (0%)

Query: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNL 68
           +G+++   +D+L  N + +FD I+  ++  +  F F L   NP+++I LIA +       
Sbjct: 9   LGEYIAAFVDWLTANGADYFDAIASTLEMMIHGFTFALTWFNPFVLIGLIAALAHFIQRK 68

Query: 69  KSM-LYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDP 127
             + ++ +   ++I+ +  W  +M TL+ ++ +TL+ +++G+PLGI+ A   L  T++ P
Sbjct: 69  WGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKPLFYTIIRP 128

Query: 128 MLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGR 187
           +LD+MQT+P+  YLIP +  FG+G VPG+I+TV+FA+   I+LT LGI  V  EL++ G+
Sbjct: 129 LLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELLDAGK 188

Query: 188 AFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYS 247
           AFG +  Q+LT+IELP A+PSI  G+ Q IMLS SMVVIA  +G+ GLG+ +++ +    
Sbjct: 189 AFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNTAD 248

Query: 248 LAPALEAGIAVTFLAVIFDRITR 270
           +A   EAG+A+  LA++ DRI +
Sbjct: 249 IALGFEAGLAIVLLAIMLDRICK 271