Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 281 a.a., glycine betaine transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  213 bits (541), Expect = 5e-60
 Identities = 101/264 (38%), Positives = 170/264 (64%), Gaps = 1/264 (0%)

Query: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWK-TVN 67
           IG +  + +D+L  N++ FFD ++ V+ + +    ++L + +P ++I ++  + W    +
Sbjct: 11  IGAWAKSFVDWLTTNFNLFFDQLANVLSAIISVLLYILQTPHPLIIIAVVTALAWWFRRS 70

Query: 68  LKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDP 127
           L    ++   L++IV  G W  +  TL+L++ +T +++ +G+P GI  AR   + +++ P
Sbjct: 71  LGIAAFTCLGLLLIVNQGYWQETTETLALVLAATFVSMAVGVPFGIAAARRAWIYSIMRP 130

Query: 128 MLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGR 187
           +LD+MQT+P+  YLIPA++ FG+G VPG+IATVIFA+P  I+LT LGI      L+E   
Sbjct: 131 ILDLMQTIPTFVYLIPALILFGLGVVPGLIATVIFAIPAPIRLTRLGIISTPPALVEAAE 190

Query: 188 AFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYS 247
           +FG T WQ+L K+ELP A+P IM G+ Q IMLS SMVVIA  +G+ GLG  ++  +   +
Sbjct: 191 SFGATPWQVLRKVELPFAMPQIMAGLTQTIMLSLSMVVIAALVGADGLGVPVLRALNTVN 250

Query: 248 LAPALEAGIAVTFLAVIFDRITRN 271
           +A   E+G+ +  LA++ DR+ R+
Sbjct: 251 IARGFESGLCIVILAIVLDRLFRS 274