Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 295 a.a., permease from Sinorhizobium meliloti 1021

 Score =  197 bits (502), Expect = 2e-55
 Identities = 99/251 (39%), Positives = 163/251 (64%), Gaps = 7/251 (2%)

Query: 22  DNYSGFFDLISYVIQSGVDFFHFLLFSINPY-LMILLIAVIVW-KTVNLKSMLYSVFFLV 79
           D    FFD + + +     F      +  P+ ++++LIAVI W  + N K +  ++  L+
Sbjct: 35  DAIESFFDPLQFFLIHAERFM-----TRTPWPIILILIAVIAWFASRNWKIVAGAIGTLL 89

Query: 80  IIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLA 139
           +I  + +WD +M T+S+I   T++++ +GIP+GI+ +RS     +++P+LDVMQT+PS  
Sbjct: 90  LIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFV 149

Query: 140 YLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTK 199
           YLIP V+  GIG+VPG+IA VI+A+PP I+LT LGI  V  +++E   AFG ++WQ L  
Sbjct: 150 YLIPVVMLLGIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKN 209

Query: 200 IELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVT 259
           +++P A+P+IM G+NQ IM++ +MVVIA  IG  GLG+ ++  I        +  G+A+ 
Sbjct: 210 VQMPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIV 269

Query: 260 FLAVIFDRITR 270
            +A+IFDR+++
Sbjct: 270 GIAIIFDRVSQ 280