Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 251 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 5/186 (2%)

Query: 88  DTSMIT---LSLIITSTLIALLLGIPLGIVKARS--KLVSTLLDPMLDVMQTLPSLAYLI 142
           D S +T   L L+  +  +A+L+ +P+GIV +R   +LVS  +  + ++  T+P+LA L 
Sbjct: 49  DISYLTVQHLELVAWAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILA 108

Query: 143 PAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIEL 202
            ++   GIG VP V       + P ++ T  G+  V   L+E     G T  Q+L ++EL
Sbjct: 109 LSMTLLGIGTVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVEL 168

Query: 203 PTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLA 262
           P A+  I  G+  A+ +      +   IG+GGLGE+I +GI    L   +   I    LA
Sbjct: 169 PNALFVIFGGIRTALAICVGSAPLVFLIGAGGLGELIFTGISLDELPMMMAGAIPTAMLA 228

Query: 263 VIFDRI 268
           V+ D I
Sbjct: 229 VLVDFI 234