Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 2/177 (1%)

Query: 90  SMITLSLIITSTLIALLLGIPLGIVKARSKLVS--TLLDPMLDVMQTLPSLAYLIPAVLF 147
           +++ L  +  +T+ A ++ + L I+  R        L   ++++ QT P +A L  AV  
Sbjct: 51  TVLHLRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPI 110

Query: 148 FGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVP 207
           +G GE P +IA  ++ + P  +    G+  +   ++E  R  G T  Q L +IELP A+P
Sbjct: 111 YGFGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALP 170

Query: 208 SIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVI 264
            I+ G+  ++++S +   I   + +  LGEVII+G+Q  +LA  L+ G+ V  LAV+
Sbjct: 171 VILTGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVL 227