Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 357 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  230 bits (587), Expect = 3e-65
 Identities = 107/256 (41%), Positives = 172/256 (67%)

Query: 17  IDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNLKSMLYSVF 76
           +D+L+ ++   F  I + I + +   +  L  + P +M+ +IA++ W+    K  + S+ 
Sbjct: 56  LDWLVLSFRPLFQAIRWPIDAVLTALNGTLVGVPPPVMLAIIALLAWQIAGRKMAIGSLI 115

Query: 77  FLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLP 136
            + +I ++G W  +M+TLSL++TS +  + LG+P GI+ ARS  ++ L  P+LD MQT P
Sbjct: 116 SMTLIGLIGAWSEAMLTLSLVLTSVMFCIALGLPSGILMARSDRLAKLSRPLLDAMQTTP 175

Query: 137 SLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQI 196
           +  YL+P V+ FGIG VPGV+ T+IFA+PP I+LT LGI QV  +L+E  R+FG +  Q+
Sbjct: 176 AFVYLVPIVMLFGIGNVPGVVVTIIFALPPLIRLTNLGIRQVPEDLVEAARSFGASKTQL 235

Query: 197 LTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGI 256
           LTK++LP A+P+IM G+NQ +ML+ SMVVIA  I  GGLG++++ GI R  +  A   G+
Sbjct: 236 LTKVQLPLALPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGV 295

Query: 257 AVTFLAVIFDRITRNL 272
           A+  LA++ DR+T+++
Sbjct: 296 AIVLLAILIDRLTQSM 311