Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 698 a.a., ATP-binding cassette domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  193 bits (491), Expect = 8e-54
 Identities = 97/248 (39%), Positives = 160/248 (64%)

Query: 24  YSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNLKSMLYSVFFLVIIVM 83
           + G F  +   +++ ++    LL  +   +  L +  + W++  L   L S   L+ I +
Sbjct: 441 FEGAFVGVIVAVRTVIEGIENLLGWLPWPVSALTLVFLAWRSAGLPLALTSSAALLYIGL 500

Query: 84  MGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIP 143
            G W+ ++ TL+L+ +S LIAL++G+P GI+ A+  L+  ++ P+LDVMQTLP+  YLIP
Sbjct: 501 FGFWERTIATLALVGSSVLIALVIGVPTGILLAKRPLLRRVITPLLDVMQTLPTFVYLIP 560

Query: 144 AVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELP 203
           AV FF +G+ P VIATVIFA+ P I+LT+LGI++V+ + +E   A G + WQ L K++LP
Sbjct: 561 AVAFFSVGKTPAVIATVIFALAPMIRLTSLGIQEVAKDAVEAAVAHGASPWQTLIKVQLP 620

Query: 204 TAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAV 263
            A  S+++G+NQ I++S SMVV+A  IG+GGLG  +++ ++       + AG+A+   A+
Sbjct: 621 LARRSLLLGINQTIVMSLSMVVVAALIGAGGLGYDVMTALRNIKGGEGVLAGVAIVLCAL 680

Query: 264 IFDRITRN 271
           I DRI ++
Sbjct: 681 IPDRIIQS 688