Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 343 a.a., putative glycine betaine/L-proline transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  159 bits (401), Expect = 1e-43
 Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 8/232 (3%)

Query: 44  FLLFSINPYLMILLIAVIVWKTVNLKSMLYSVFFLVIIVMMGL---WDTSMITLSLIITS 100
           F   +I  +++I L+ +  W     + +  ++F  V+ +  GL    D ++ TLS+I   
Sbjct: 102 FTFTTIPWWILIPLLVLATWAAT--RKLGVTIFVAVVFLFFGLIDHLDVALQTLSIIFVC 159

Query: 101 TLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGV--IA 158
           T +++L G+P+GI+ +RS  +  ++ P+LD++QTLPS  YLIP +  F + E P +  IA
Sbjct: 160 TGLSVLFGVPVGIMMSRSDRMQKIMLPILDMLQTLPSFVYLIPLIFLFSVTE-PKLYGIA 218

Query: 159 TVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIM 218
            +++A+ P I+LT LGI  V  +++E   AFG T  Q L  ++LP A+P+IM GVNQ IM
Sbjct: 219 IILYAIVPVIRLTDLGIRLVDKDVVEAADAFGMTDRQKLYGVQLPLALPNIMAGVNQTIM 278

Query: 219 LSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFDRITR 270
           +S +MVVIA  + + GLG +++ GI+   L   L AG  +  LAV+ DR ++
Sbjct: 279 MSLAMVVIASLVSAPGLGVLVLRGIRNLELGVGLVAGFGIVLLAVVLDRCSK 330