Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 222 a.a., binding-protein-dependent transport system inner membrane protein from Klebsiella michiganensis M5al

 Score = 92.4 bits (228), Expect = 7e-24
 Identities = 46/188 (24%), Positives = 99/188 (52%), Gaps = 4/188 (2%)

Query: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYLIPAVLFFGIGEV 153
           L  ++ S ++A  + +PLGI+    +  + ++  + ++ + +PSL  ++  ++ FG  ++
Sbjct: 31  LYYVLISIVVASAIALPLGIILGYWRKGAFVIINLFNIGRAIPSLGLILLCIIVFGFNDI 90

Query: 154 PGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMMGV 213
           P   A V  ++PP +    +GI     +L +  +A G T  Q L ++ +P A P I+ G+
Sbjct: 91  PVFTALVAMSIPPILTNAWVGIYHADRQLCDAAKALGMTPLQSLWQLRIPLAAPLILAGL 150

Query: 214 NQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAV----IFDRIT 269
             A++   +  V+A + G GGLG  +I G+ +  +   +   + V+ LA+    +F  ++
Sbjct: 151 RTALVQLIATAVVAAYAGLGGLGRFLIDGLGQRDIPQVIAGSLVVSLLAIGCELLFSLLS 210

Query: 270 RNLVGSKI 277
           R +V + +
Sbjct: 211 RRIVPAPV 218