Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 283 a.a., glycine/betaine/L-proline ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  221 bits (563), Expect = 1e-62
 Identities = 112/265 (42%), Positives = 170/265 (64%), Gaps = 1/265 (0%)

Query: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNL 68
           +G +L    D +++  SG     S V  +G+D    LL SI P+  I ++A++ W+    
Sbjct: 11  LGAWLEAFTDNMVEWCSGATRAFSTVAGNGIDMLESLLGSIPPWAFIPVVALLAWRATRK 70

Query: 69  KSM-LYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDP 127
             +  +++    +I  +GLW+ +M T++L++ +T +A++ G+PLGI  A +  V  +L P
Sbjct: 71  PGIGAFALLGFGLIWNLGLWEATMSTIALVLVATALAVVTGVPLGIAAAVNVTVRKVLMP 130

Query: 128 MLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGR 187
           +LD+MQT+P+  YLIPA+ FFG+G+V  V ATV+FAMPPAI+ T LGI QV ++L+E   
Sbjct: 131 VLDLMQTMPAFVYLIPAIPFFGLGKVAAVFATVVFAMPPAIRFTCLGIRQVPDDLVECAE 190

Query: 188 AFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYS 247
           AFG + WQ L K+ELP A P+I+ GVNQ IML+ SMVVIA  IG+ GLG  +   IQR  
Sbjct: 191 AFGTSRWQRLVKLELPLAAPTILAGVNQTIMLALSMVVIAAMIGARGLGGEVWKAIQRLE 250

Query: 248 LAPALEAGIAVTFLAVIFDRITRNL 272
           L    EAGI +  +A+  DR+ +++
Sbjct: 251 LGSGFEAGIGIVIVAICLDRVLQHI 275