Pairwise Alignments

Query, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 513 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  197 bits (500), Expect = 5e-55
 Identities = 92/256 (35%), Positives = 157/256 (61%)

Query: 15  NLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNLKSMLYS 74
           + I + + N   FFD +++ I++ +D    +L      ++  LI ++ W T  L++ +YS
Sbjct: 254 DFIAWTVRNTEAFFDALTFGIRTLLDALEVILVQTPWIVIASLIVLLTWLTAGLRTAIYS 313

Query: 75  VFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQT 134
             FL  + ++G W+ +M TL+L+ T+  +++++GIPLG+  AR       + P++D MQT
Sbjct: 314 SAFLAYMGLLGFWEAAMTTLALLGTAACLSIVIGIPLGMFAARRPRFYAFIQPIMDFMQT 373

Query: 135 LPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSW 194
           +P+  +++P + FFG+G+   VI T+IF   P ++LT LG+  V   + E   +FG   W
Sbjct: 374 MPAFVFMVPVIAFFGVGKPAAVIVTMIFGGTPVVRLTVLGLRGVPESVREAAISFGANKW 433

Query: 195 QILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEA 254
            +LTK++LP A PSI  G+NQ IMLS +MVV+A  IG+ GLGE ++  +Q  ++   + A
Sbjct: 434 YLLTKVDLPLAGPSIRAGINQTIMLSLAMVVVASLIGAKGLGEDVLEALQYANVGQGILA 493

Query: 255 GIAVTFLAVIFDRITR 270
           G ++ F A+I DRI +
Sbjct: 494 GFSILFCAMILDRIVQ 509