Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 321 a.a., putative glycine betaine transport system substrate binding protein from Phaeobacter inhibens DSM 17395

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 72/300 (24%), Positives = 119/300 (39%), Gaps = 53/300 (17%)

Query: 36  IKFGLPPWPGVTVKSNVVKVILEEQ-GYNVELNQLDAGITYAKL--ADGDLDVSLAGWLP 92
           +K G+P W G    ++++  ++E + G  VE    +    +  +    GD+DV    WLP
Sbjct: 27  VKIGVPSWTGAQAIAHLLGAVVEMRIGGKVEFVPGNNATIFQAMDQGKGDIDVHPDVWLP 86

Query: 93  TTHEEYWTQYGNQLEMVHV--NVGKTALGLAVPTYTYEAG-IQSITDL------------ 137
              + +  +Y ++   V +  N  +   G  V     EA  +  I DL            
Sbjct: 87  N-QQSFTQKYVDEAGTVTLSSNPYEGNQGFCVSQDFGEANNVTDIADLGRPDVAALMDSD 145

Query: 138 -NGNEELFDGKIIGIEPGAGIMSNTEKAIDSYSLSGYELQSSSTPAMMAELARAINEDEN 196
            NG  EL+    IG    A    N  K  D   L   +   +      A +  +I + E 
Sbjct: 146 GNGKGELW----IGAPGWASANVNEVKTRDYGLLDFIDPVRAEESVKTARIKDSIAKGEG 201

Query: 197 IVVTVWEPHSVFFKFDIKMLDDPEKVYGDGDKVYTIARTDFKDDY--------------- 241
                ++PH+V++ FD++ML +P     D +K   +  +D  D Y               
Sbjct: 202 YAFYCYKPHAVWYMFDVRMLSEPTF---DPEKYTMVQPSDDPDWYDKSSVATKDALKNVQ 258

Query: 242 -----------PEVYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPELVENW 290
                      P + EFF  F +     S + Y+ S +G +P +VA EWV  NP+ V+ W
Sbjct: 259 IAWSNSLEGRSPAIAEFFANFALTADDVSGFAYEISGKGREPADVAREWVEANPDRVDAW 318