Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 460 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  152 bits (384), Expect = 2e-41
 Identities = 118/422 (27%), Positives = 200/422 (47%), Gaps = 48/422 (11%)

Query: 6   VLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGN----LLFF------------- 48
           VL  + V  +  K+G E+  R   P V GE+L G++ G     LL F             
Sbjct: 35  VLLGLVVVYLASKLGGELCVRVNLPPVLGELLGGVLVGTSVLRLLVFPSSGAGAEDVVLL 94

Query: 49  -------GIVDSSHLTLH--ENDIFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAA 99
                  G  D+   T+   ++++   LS +G++ LLF  GLE ++  L K    + + A
Sbjct: 95  NFLQQISGAPDNWMPTIFATQSEVISVLSEIGVIILLFEIGLESNLDELLKVGTKAAIVA 154

Query: 100 VLGAVFPLIFGYISLSYFGYTAK-ESIVGGVILTATSIGITARLLMDLKVLKTDVGAAAI 158
           V+G   P   G + L Y  + A   ++  G  LTATSIGITA++L +L  L +  G   I
Sbjct: 155 VVGVAAPFAAGTLGLIYLFHIATIPAVFAGAALTATSIGITAKVLSELGRLNSPEGQIII 214

Query: 159 SASILDDFLGLILLILA--------VGSGSLLGLISEITVFFIITGYFGWKLIKKYLIFA 210
            A+I+DD LG+I+L +         +   +++ LI   T F +   + G  L   ++   
Sbjct: 215 GAAIIDDILGIIVLAVVSSLAKTGEIRPSNIVILIVSSTAFLVGAIFIGRWLNPFFVNLV 274

Query: 211 EKFHIEKTVLSFTIALMFLFSFLSESWFEVAIEGAFMAGLILSKTSEGKTLAKEIKSIGN 270
                   VL   +    L   +++     AI GAF  GLIL++T +G+ L +++K + +
Sbjct: 275 SSMQTRGEVLVVALVAAILAGLIAQFVRLEAILGAFAVGLILAETEKGEELKEQVKPLAD 334

Query: 271 SFLIPLFFIYTGARLNLTAF-----LNHEALILATIFIIVGVFTKFVGWGLGAKIMGKWD 325
             L+P+FF+  GA+ +L+       +N   LI+A   ++V V  K +    G  ++G   
Sbjct: 335 -VLVPIFFVVVGAKTDLSVLNPADPVNRAGLIIAGFLLVVAVLGKVI---TGFSLVGSST 390

Query: 326 LKKSIQLASASVPRAEIALINLMIAVSAGVILEENISKFIAATLIFVTFSIVITPPLLKK 385
               + +    +PR E+ L+   +  S+G IL E+++  +   +I  TF   + PPLL+ 
Sbjct: 391 PLNRLAIGVGMIPRGEVGLVFAGVGASSG-ILSESLNAGVIVMVIMTTF---LAPPLLRL 446

Query: 386 VF 387
            F
Sbjct: 447 AF 448