Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 715 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  106 bits (264), Expect = 2e-27
 Identities = 101/406 (24%), Positives = 185/406 (45%), Gaps = 30/406 (7%)

Query: 6   VLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLH---END 62
           VL  + V ++  ++   ++ RFG P V GEI  GI+ G      I     L +       
Sbjct: 9   VLIEILVVILCSRLLGSLVHRFGQPLVVGEIAAGILLGPSFLGAIAPKLELAIFPQASGS 68

Query: 63  IFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGY---ISLSYFGY 119
             + L+ VG++F +F+ GLE++   L+    +++  + L  + P   G    I L  F  
Sbjct: 69  YLELLAQVGLIFFMFLIGLELNPQYLRGRLRLALWVSNLSVLLPFGLGIGLAIGLQRFYP 128

Query: 120 TAKESIVG--------GVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLIL 171
                 VG        GV L+ T+  + AR+L +  + +T +G+ A++ + +DD     L
Sbjct: 129 AILVQGVGLLPVSLFLGVALSITAFPVLARILTERNLQRTPLGSLALTCAAIDDLTAWCL 188

Query: 172 LILAVGSGSLLGLISEITVFFIITGYFGWKLI--KKYL------IFAEKFHIEKTVLSFT 223
           L +A+       +++ I    +   Y G  L   +++L       +A    + + +L+  
Sbjct: 189 LAIAIAVTRTNSMVAAIPTIVLAMLYCGGMLTMGRRWLGNVISRWYARSGELSQVLLATI 248

Query: 224 IALMFLFSFLSESWFEVAIEGAFMAGLILSKTSE-GKTLAKEIKSIGNSFLIPLFFIYTG 282
              + + + L+E      I GAF+ G+IL K     + LA   +    + L+P+FF Y+G
Sbjct: 249 YMGVLVSALLTELIGIHFIFGAFLLGVILPKNQALTRDLALRTEDFVLTILLPVFFAYSG 308

Query: 283 ARLNLTAFLNHEAL-ILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPRAE 341
            R +L+  LN  AL  +  + ++V +  K  G  L A+  G   ++++  L      R  
Sbjct: 309 LRTDLSR-LNQPALWFIGGLILVVAIAGKVGGAYLAAR-WGNMSVREAQTLGWLMNTRGL 366

Query: 342 IALINLMIAVSAGVILEENISKFIAATLIFVTFSIVITPPLLKKVF 387
             L+ L I +S GVI  E  +  +   L+    + V+T PLL +++
Sbjct: 367 TELVVLNIGLSLGVISSELFTLLVIMALV----TTVMTTPLLNRLY 408