Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 408 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 87/367 (23%), Positives = 171/367 (46%), Gaps = 22/367 (5%)

Query: 30  PSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDIFDFLSTVGIMFLLFISGLEIDIHRLK 89
           P + G IL G++ G  LF       ++   + D    L+ +G ++L+F++GLEID+ + +
Sbjct: 37  PELLGLILAGVLLGPSLF-------NILEPKADTVVLLAGIGKLYLMFLAGLEIDLSQFQ 89

Query: 90  KTENISIVAAVLGAVFPLIFGYISLSYFGYTAKESIVGGVILTATSIGITARLLMDLKVL 149
              + S+         PL+ G +    FG+    + + G +L + ++ +T  ++    +L
Sbjct: 90  AARDRSLRFGFATFAIPLLVGLLIGLGFGFGWNSAFLIGSLLASHTL-LTLPIVEHYGLL 148

Query: 150 KTDVGAAAISASILDDFLGLILLILAV----GSGSLLGLISEITVF--FIITGYFGWKLI 203
           +    AA + A+I  D   L++L + +    G G L+ ++ ++ +F  FI    +G K +
Sbjct: 149 RQRAVAATLGATIFTDIGALLVLAVCLAVQSGDGGLIAIVRDLLIFSVFITLVLYGVKPL 208

Query: 204 KKYLIFAEKFHIEKTVLSFTIALMFLFSFLSESWFEVAIEGAFMAGLILSKTSEGKTLAK 263
            ++  F    + E+    F   ++ L S  +++     I GAF+AGL +++T + + + +
Sbjct: 209 SRWF-FRLAHNNERNQFLFIFLVLLLVSLGAQAIQLDMIIGAFLAGLAVNETLQDEPVRE 267

Query: 264 EIKSIGNSFLIPLFFIYTGARLNLTAFLNHEALILA---TIFIIVGVF-TKFVGWGLGAK 319
           ++   G    +P FFI  G  LN  AF   E L  A   T  I+ G+F +KF+   +  K
Sbjct: 268 KVDFFGKVMFLPCFFIDIGLLLNPAAF--WETLTTAGSLTFAIVGGLFGSKFLA-AIAVK 324

Query: 320 IMGKWDLKKSIQLASASVPRAEIALINLMIAVSAGVILEENISKFIAATLIFVTFSIVIT 379
               +   +   + S S+P+    L      + A ++        IA  LI V    ++T
Sbjct: 325 QWEGYSWPEVRLMWSLSLPQVAATLAAAQAGLQAQLLSPAVFDSIIALVLITVLVGPLLT 384

Query: 380 PPLLKKV 386
               +++
Sbjct: 385 DRFAQQI 391