Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 401 a.a., cation:proton antiporter from Rhodanobacter denitrificans MT42

 Score =  159 bits (403), Expect = 1e-43
 Identities = 113/388 (29%), Positives = 195/388 (50%), Gaps = 19/388 (4%)

Query: 4   SWVLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDI 63
           S +LFT+ V  +  +IG EI  R   P V GEI  G   G  L   I      T      
Sbjct: 5   SEILFTLFVVFVAAQIGGEIAQRLKLPGVVGEIAAGCAIGPSLLGWITPEQIAT---GTP 61

Query: 64  FDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGYTAKE 123
            D L+ +G++ LLF  GLE  +  LKK   ++ V  V+G + P   G +     G+    
Sbjct: 62  LDVLAEIGVILLLFAVGLETRLEDLKKVGKVAFVVGVVGVLVPFGMGSVWAHGNGFDWDR 121

Query: 124 SIVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLILLILAV---GSGS 180
           S+       ATS GITAR+L +L  L+       + A+++DD L ++LL + V   G GS
Sbjct: 122 SLFVAAAFVATSAGITARVLQELGALQRIESKVILGAAVIDDILAMLLLGVVVSLQGGGS 181

Query: 181 -----LLGLISEITVFFIITGYFGWKLIKKYLIFAEKFHIEKTVLSFTIALMFLFSFLSE 235
                LL +++    F  + G+ G ++++    + +K     + L   +AL    ++LS 
Sbjct: 182 IDATHLLVVLAGAVGFIAVIGWGGARVMRWNSAWLDKPLGPHSPLMIVLALCLGLAWLST 241

Query: 236 SWFEVAIEGAFMAGLILSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAFLNHEA 295
            +   AI GAF+AG+I S+T +  TL K+ + +  + L P FF+ TG++++L    + EA
Sbjct: 242 RFGLAAIIGAFLAGMIASETRQQHTLEKQTQPL-LALLTPFFFVVTGSKVDLHELASAEA 300

Query: 296 LILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPRAEIALINLMIAVSAGV 355
           L +  +   + + +KF+G  LG+  +G+   + +  +    VPR E+ ++   + ++AGV
Sbjct: 301 LWMLAVVTAIAIVSKFIGGWLGSLSLGR---RSATIIGFGMVPRGEVGIVVATLGLAAGV 357

Query: 356 ILEENISKFIAATLIFVTFSIVITPPLL 383
                 +  +A +L+    + ++TPP+L
Sbjct: 358 FDNRIYAIIVAMSLL----TAMVTPPVL 381