Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 592 a.a., cation:proton antiporter from Rhodopseudomonas palustris CGA009

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 87/389 (22%), Positives = 168/389 (43%), Gaps = 39/389 (10%)

Query: 23  IMWRFGFPSVFGEILIGIIFG----NLLFFGIVDSSHLTLHENDIFDFLSTVGIMFLLFI 78
           +M RF    V G ++ G++ G      +   +   S++T+   D  D L+ +G+ FLLF 
Sbjct: 26  VMTRFRVSPVLGFLVAGLVLGPHSLGRIGADLPWLSYVTITSQDAVDRLAELGVAFLLFT 85

Query: 79  SGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGYTAKESIVGGVILTATSIGI 138
            GLE+   RL     +     +   V            FG T + S+V G  L  +S  I
Sbjct: 86  IGLELSFDRLWTMRRLVFGLGMSQVVLTTAAISGIALIFGNTVESSLVIGACLALSSTAI 145

Query: 139 TARLLMDLKVLKTDVGAAAISASILDDFLGLILLIL--------------------AVGS 178
             +LL + K L T  G +  +  +  D   + +L L                    AV  
Sbjct: 146 VLQLLAEQKRLATVAGRSIFAVLLAQDLAVVPILFLIVVFGKAAGDAAGGGAASTGAVWL 205

Query: 179 GSLLGLISEITVFFIITGYFGWKLIKKYLIFAEKFHIEKTVLSFTIALMFLFSFLSESWF 238
           G  + L+       +I G FG  ++++        H  +  ++  + ++   S ++    
Sbjct: 206 GLAMALVQAAAAILLIIG-FGRLVLRRLFRLVASTHNRELFMATILFVVVGTSLVTHVAG 264

Query: 239 EVAIEGAFMAGLILSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAFLNHEALIL 298
                GAF+AGL+L++T   + +  +I+      L+ LFFI  G R++L     + A++ 
Sbjct: 265 LSMALGAFLAGLVLAETEFRRQVEVDIEPF-KGMLLGLFFISVGMRIDLAEVARYPAMVA 323

Query: 299 ATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPRA---EIALINLMIAVSAGV 355
            ++  +  +    +     A +   + L + + +A AS+  A   E A + L +A S+G+
Sbjct: 324 TSVIGMTALKALVI-----AGLTWLFRLSRPV-IAEASLLLAGGGEFAFLVLGLASSSGL 377

Query: 356 ILEENISKFIAATLIFVTFSIVITPPLLK 384
           +  E + +F+   L+  + ++++TP L +
Sbjct: 378 VTRE-VEQFM---LLVSSGTMMLTPYLAR 402