Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 397 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  123 bits (308), Expect = 1e-32
 Identities = 112/405 (27%), Positives = 182/405 (44%), Gaps = 49/405 (12%)

Query: 8   FTVGVCLI--FGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDIFD 65
           F + +CLI  FG++  E   R   P+V GEIL GI+ G  L   I     L +       
Sbjct: 6   FVLSLCLILLFGRVLGEAFKRLQLPAVVGEILAGILIGPSLLGWIAPHETLAV------- 58

Query: 66  FLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFP-LIFGYISLSYFGYTAKES 124
            ++ +G++ LLF  G E  I  L +  N +   A+LG   P ++ G + L Y       +
Sbjct: 59  -MAELGVILLLFSIGCETSIKHLFQAGNSAAGVALLGIALPAVVIGLVCLLYLDLPGFTA 117

Query: 125 IVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLILLILA--VGSGSLL 182
           +  G  LTATSIGI+ R++   K  ++  G   + A+++DD  G+ILL L     S   +
Sbjct: 118 LYLGCALTATSIGISVRVMAQAKQSQSQEGHIILGAAVIDDIAGVILLSLLFNFASSGEV 177

Query: 183 GLISEITVFFIITGYF----GWKLIKKYLIFAEKFHIEKTVLS--FTIALMFLFSFLSES 236
           GLI    +   I G+         +  YL  A K   E+T      T+ L+ LF++L+ +
Sbjct: 178 GLIPSGLLILKIVGFLLLAPPMARLLLYLFRAVKPKEEETGYEAIVTMILICLFAWLAHA 237

Query: 237 WFEVAIEGAFMAGLILSK----------------TSEGKTLAKEIKSIGNSFLIPLFFIY 280
               A+ G F  GL LS+                T E +  +K +  I      P+FF+Y
Sbjct: 238 LHAPALLGGFAVGLALSRQFISPLNRYLQNPFAFTHEMEVESKPLVDI----FAPIFFVY 293

Query: 281 TGARLNLTAF-LNHEALILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPR 339
            G  L+L+   L    L+   +  ++ + TK +    G ++ G   L+    + SA VPR
Sbjct: 294 VGISLDLSQIDLGWSGLLTLLMLSLLAIITKMMA---GLRVPG--HLRTKAIVGSAMVPR 348

Query: 340 AEIALINLMIAVSAGVILEENISKFIAATLIFVTFSIVITPPLLK 384
            E+ L+   + +  G+I      K     ++ +  + +  P LLK
Sbjct: 349 GEVGLVFAEMGLQMGII----SPKLFTELVLIIAITTIAGPLLLK 389