Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 389 a.a., cation:proton antiporter from Methanococcus maripaludis JJ

 Score =  126 bits (317), Expect = 9e-34
 Identities = 98/396 (24%), Positives = 189/396 (47%), Gaps = 25/396 (6%)

Query: 4   SWVLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDI 63
           ++ LF + +  IF  I  +I+ RF  P++   +L GI+ G    FG+       +  +  
Sbjct: 3   TYFLFFIILTSIF--IVPQILKRFNVPTITATMLAGILIGP---FGLN-----IIQTSTT 52

Query: 64  FDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGYTAKE 123
            D  +  G++FL+F++GLE+D   LK     S+V ++   + P I GY+   YFG     
Sbjct: 53  LDTFAAFGVIFLMFLAGLEVDNETLKDEFKNSLVLSLFSMLIPSIGGYLIGQYFGLDFIG 112

Query: 124 SIVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLILLILAVGSGSLLG 183
           S++  VI ++ S+GI   L+ +L ++K+  G   ISAS++ D + LI++ + +  G   G
Sbjct: 113 SLLYAVIFSSHSVGIVYALMDELGLIKSRFGTTVISASVVIDLISLIVISILIKMGG-SG 171

Query: 184 LISEITVFFIITGYFGWKLI-------KKYLIFAEKFHIEKTVLSFTIALMFLFSFLSES 236
           + S+I  F ++   +   L+       K  L   +KFH++K  + F + ++ +   + E 
Sbjct: 172 ITSDIIPFVVLIAAYIIALLIIIPLISKLILKELKKFHVQK--IHFILLIILISIIVGEH 229

Query: 237 WFEVAIEGAFMAGLI----LSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAFLN 292
                I GAF+ G+     L+K    + L + + +IG    IPLFF+  G   +++   N
Sbjct: 230 IGIHPIIGAFIIGIAVSEELTKEEHDQVLNENLNAIGYGIFIPLFFLNLGMTTDISVIFN 289

Query: 293 HEALILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPRAEIALINLMIAVS 352
            + + L  + ++  +  K        +I+  +D  KS      +VP    +L+   +   
Sbjct: 290 FDNISLIIVSVVTLIGLKISSGYFSLRIL-DYDKLKSFCGGLLTVPSLTASLVGATLGRD 348

Query: 353 AGVILEENISKFIAATLIFVTFSIVITPPLLKKVFE 388
            G++ E+     +   L+  T + +    L+ K ++
Sbjct: 349 LGILPEKFFVSVVVIALLTSTVAPIYVKSLVSKNYD 384