Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 757 a.a., putative Na+/H+ anitporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 87.8 bits (216), Expect = 9e-22
 Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 37/395 (9%)

Query: 2   DISWVLFTVGVC-LIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFF--GIVDSSHLTL 58
           D++ +L   GV  L+F K+          P V G ++ G +    + +   ++D++++  
Sbjct: 10  DLALILICAGVMTLLFKKLKQ--------PLVLGYVVAGFLASPHMPYTPSVMDTANIKT 61

Query: 59  HENDIFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFG 118
             +        +G++FLLF  GLE    ++ K    +I+AA       ++ G      FG
Sbjct: 62  WAD--------IGVIFLLFALGLEFSFKKIVKVGGSAIIAACTIIFCMILLGIGVGMGFG 113

Query: 119 YTAKESIVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLILLIL---- 174
           +   +S+  G ++  +S  I  +   DL + K       +S  IL+D L ++L+++    
Sbjct: 114 WHRMDSLFLGGMIAMSSTTIIYKAFDDLGLRKKQFTGLVLSILILEDILAIVLMVMLSTM 173

Query: 175 AVGSG----SLLGLISEITVFFIITGYFGWKLIKKYLIFAEKFHIEKTVLSFTIALMFLF 230
           AV        +L  I ++  F I+    G  LI ++L    K   E+T+L  ++AL F  
Sbjct: 174 AVSHNFEGTEMLESIGKLLFFLILWFVVGIYLIPEFLKRCRKLMGEETLLIVSLALCFGM 233

Query: 231 SFLSESWFEVAIEGAFMAGLILSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTAF 290
             ++ +    A  GAF+ G IL++T E +++ + +K + + F   +FF+  G  ++    
Sbjct: 234 VVMAANTGFSAAFGAFIMGSILAETIEAESIDRLVKPVKDLF-GAIFFVSVGMMVDPAMI 292

Query: 291 LNHE-ALILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPRAEIALINLMI 349
           + +   +I+ TI +I+G  T    +G    I+    LK ++Q   +     E A I   +
Sbjct: 293 IEYAIPIIVITIAVILGQAT----FGTFGVILSGKPLKTAMQCGFSLTQIGEFAFIIASL 348

Query: 350 AVSAGVILEENISKFIAATLIFVTFSIVITPPLLK 384
            VS  V   + +   + A  +  TF   +TP +++
Sbjct: 349 GVSLHV-TSDFLYPIVVAVSVITTF---LTPYMIR 379



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 36/334 (10%)

Query: 7   LFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLHENDIFDF 66
           L  V + L FG +   +    GF + FG  ++G I    +    +D   L     D+F  
Sbjct: 222 LLIVSLALCFGMV--VMAANTGFSAAFGAFIMGSILAETIEAESID--RLVKPVKDLF-- 275

Query: 67  LSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGYTAKESIV 126
               G +F + + G+ +D   + +     IV  +   +    FG   +   G   K ++ 
Sbjct: 276 ----GAIFFVSV-GMMVDPAMIIEYAIPIIVITIAVILGQATFGTFGVILSGKPLKTAMQ 330

Query: 127 GGVILTATSIG----ITARLLMDLKVLKTDVGAAAISASILDDFLGLILLILAVGSGSLL 182
            G  LT   IG    I A L + L V    +    ++ S++  FL   ++ LA  + S +
Sbjct: 331 CGFSLT--QIGEFAFIIASLGVSLHVTSDFLYPIVVAVSVITTFLTPYMIRLAEPASSFV 388

Query: 183 GLISEITVFFIITGYFGWK--------LIKKYLIFAEKFHIEKTVLSFTIALM---FLFS 231
                 +    +  Y            L KK L+   +  +  +++S +I  +   F+  
Sbjct: 389 DAHLPASWRKFLMRYSSGSQTVLNHENLWKKLLLAMVRITVVYSIVSISIIALSFRFVVP 448

Query: 232 FLSESW--FEVAIEGAFMAGLILSKTSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNLTA 289
           F  E+   F  ++ GA    L +S        A  +K   +   + L+      R  L +
Sbjct: 449 FFKENLPHFWASLLGAVFIILCISPFLR----AIMVKKNHSVEFMTLWHDNRANRAPLVS 504

Query: 290 FLNHEALILA--TIFIIVGVFTKFVGWGLGAKIM 321
            +    +I A   IF+I G+F   +G  +G  ++
Sbjct: 505 TIVIRIMIAALFVIFVISGLFKASIGLIIGVAVL 538