Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 711 a.a., Na+/H+ anti-porter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  105 bits (263), Expect = 3e-27
 Identities = 98/395 (24%), Positives = 185/395 (46%), Gaps = 38/395 (9%)

Query: 2   DISWVLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNLLFFGIVDSSHLTLHEN 61
           D +WV F V + ++F  +   I+ R   P + G IL G++ G   F          L  +
Sbjct: 14  DPTWVFFLVLIIILFAPM---ILGRLHIPHIIGMILAGVLIGEHGFH--------VLDRD 62

Query: 62  DIFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFG-YISLSYFGYT 120
             F+    VG+ +++F++GLE+D+   KK    S+V  +L  + P+  G + S+S  GY 
Sbjct: 63  SSFELFGKVGLYYIMFLAGLEMDMEDFKKNRMKSVVFGLLTFLIPMALGIWSSMSMLGYG 122

Query: 121 AKESI-VGGVILTATSIG---ITARLLMDLKVLKTDVGAAAISASILDDFLGLILLILAV 176
              ++ +  +  + T I    I+   L  L+ +   +G  AI+ +       L L+ILAV
Sbjct: 123 FLTAVLLASMYASHTLIAYPIISRYGLSRLRSVNITIGGTAITVT-------LALIILAV 175

Query: 177 GSGSLLGLISEITVFFII--TGYFGWKLIKKY----LIFAEKFHIEKTVLSFTIALMFLF 230
             G   G +  +   F++    + G+ +I  +      F  K+        F +A++FL 
Sbjct: 176 IGGMFKGTVDGLFWVFLVAKVAFLGFLIIFFFPRIGRWFFRKYDDSVMQFVFVLAMVFLG 235

Query: 231 SFLSESWFEVAIEGAFMAGLILSK-TSEGKTLAKEIKSIGNSFLIPLFFIYTGARLNL-T 288
             L E      I GAF+AGL+L++       L   ++ +GN+  IP F I  G  +++ +
Sbjct: 236 GGLMEFVGMEGILGAFLAGLVLNRLIPHVSPLMNRLEFVGNALFIPYFLIGVGMIIDVRS 295

Query: 289 AFLNHEALILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKS----IQLASASVPRAEIAL 344
            F   EAL +A +  +V  F+K++   +  KI      ++S    +  A A+   A + +
Sbjct: 296 LFTGGEALKVAVVMTVVATFSKWLAAWITQKIYRMQPNERSMIFGLSNAQAAATLAAVLI 355

Query: 345 INLMIAVSAGVILEENISKFIAATLIFVTFSIVIT 379
            + +I  +   +L +++   +  T++ + F+ VI+
Sbjct: 356 GHEIIMENGERLLNDDV---LNGTVVMILFTCVIS 387